Selected Publications

 

UBE3B is a calmodulin-regulated, mitochondria-associated E3 ubiquitin ligase.

Braganza A, Li J, Zeng X, Yates NA, Dey NB, Andrews J, Clark J, Zamani L, Wang X, St. Croix C, O'Sullivan R, Garcia-Exposito L, Brodsky JL, Sobol RW.

J Biol Chem. 2016 Dec 21. DOI:10.1074/jbc.M116.766824

 

Decellularized zebrafish cardiac extracellular matrix induces mammalian heart regeneration.

Chen WC, Wang Z, Missinato MA, Park DW, Long DW, Liu HJ, Zeng X, Yates NA, Kim K, Wang Y.

Sci. Adv. 2016;2: e1600844; Nov 18 2016.

 

Opposing Effects of Cyclooxygenase-2 (COX-2) on Estrogen Receptor β (ERβ) Response to 5α-Reductase Inhibition in Prostate Epithelial Cells.

Liu TT, Grubisha MJ, Frahm KA, Wendell SG, Liu J, Ricke WA, Auchus RJ, DeFranco DB.

J Biol Chem. 2016 Jul 8;291(28):14747-60. doi: 10.1074/jbc.M115.711515. Epub 2016 May 13.

PMID: 27226548

 

ERK1/2 Activation in Preexisting Oligodendrocytes of Adult Mice Drives New Myelin Synthesis and Enhanced CNS Function.

Jeffrles MA, Urbanek K, Torres L, Wendell SG, Rubio ME, Fyffe-Maricich SL.

J Neurosci. 2016 Aug 31.36(35):9186-9200

 

The identification of peptides by nanoLC-MS/MS from human surface tooth enamel following a simple acid etch extraction.

Stewart NA, Molina GF, Issa JP, Yates NA, Sosovicka M, Vieira AR, Line SR, Montgomery J, Gerlach RF.

Royal Society of Chemistry. 2016 May 28.

DOI:10.1039/c6ra05120k

 

Threonine 89 Is an Important Residue of Profilin-1 That Is Phosphorylatable by Protein Kinase A.

Gau D, Veon W, Zeng X, Yates N, Shroff SG, Koes DR, Roy P.

PLoS One. 2016 May 26.

PMID:27228149

 

APOE*4 genotype is associated with altered levels of glutamate signaling proteins and synaptic co-expression networks in the prefrontal cortex in mild to moderate Alzheimer disease.

Sweet RA, MacDonald ML, Kirkwood CM, Ding Y, Schempf T, Jones-Laughner J, Kofler J, Ikonomovic MD, Lopez OL, Fitz NF, Koldamova R, Yates NA.

Mol Cell Proteomics. 2016 Apr 21.

PMID:27103636

 

Abnormal lipid processing but normal long-term repopulation potential of myc-/- hepatocytes.

Edmunds LR, Otero PA, Sharma L, D'Souza S, Dolezal JM, David S, Lu J, Lamm L, Basantani M, Zhang P, Sipula IJ, Li L, Zeng X, Ding Y, Ding F, Beck ME, Vockley J, Monga SP, Kershaw EE, O'Doherty RM, Kratz LE, Yates NA, Goetzman EP, Scott D, Duncan AW, Prochownik EV.

Oncotarget. 2016 Apr 20.

PMID:27105497

 

Altered Levels of Visinin-Like Protein 1 Correspond to Regional Neuronal Loss in Alzheimer Disease and Frontotemporal Lobar Degeneration.

Kirkwood CM, MacDonald ML, Schempf TA, Vatsavayi AV, Ikonomovic MD, Koppel JL, Ding Y, Sun M, Kofler JK, Lopez OL, Yates NA, Sweet RA.

J Neuropathol Exp Neurol. 2016 Jan 14.

PMID:26769253

 

c-Myc and AMPK Control Cellular Energy Levels by Cooperatively Regulating Mitochondrial Structure and Function.

Edmunds LR, Sharma L, Wang H, Kang A, d'Souza S, Lu J, McLaughlin M, Dolezal JM, Gao X, Weintraub ST, Ding Y, Zeng X, Yates N, Prochownik EV.

PLoS One. 2015 Jul 31.

PMID:26230505

 

Altered glutamate protein co-expression network topology linked to spine loss in the auditory cortex of schizophrenia.

MacDonald ML, Ding Y, Newman J, Hemby S, Penzes P, Lewis DA, Yates NA, Sweet RA.

Biol Psychiatry. 2015 Jun 1.

PMID:25433904

 

HSP90 regulates DNA repair via the interaction between XRCC1 and DNA polymerase β.

Fang Q, Inanc B, Schamus S, Wang XH, Wei L, Brown AR, Svilar D, Sugrue KF, Goellner EM, Zeng X, Yates NA, Lan L, Vens C, Sobol RW.

Nat Commun. 2014 Nov 26.

PMID:25423885

 

Isolation of serpin-interacting proteins in C. elegans using protein affinity purification.

Miedel MT, Zeng X, Yates NA, Silverman GA, Luke CJ.

Methods. 2014 Aug 1.

PMID:24798811

 

Growth arrest by the antitumor steroidal lactone withaferin A in human breast cancer cells is associated with down-regulation and covalent binding at cysteine 303 of β-tubulin.

Antony ML, Lee J, Hahm ER, Kim SH, Marcus AI, Kumari V, Ji X, Yang Z, Vowell CL, Wipf P, Uechi GT, Yates NA, Romero G, Sarkar SN, Singh SV.

J Biol Chem. 2014 Jan 17.

PMID:24297176

 

Lysine 63-linked polyubiquitination is required for EGF receptor degradation.

Huang F, Zeng X, Kim W, Balasubramani M, Fortian A, Gygi SP, Yates NA, Sorkin A.

Proc Natl Acad Sci U S A. 2013 Sep 24.Epub 2013 Sep 9.

PMID:24019463